cellsystem.utils package

Submodules

cellsystem.utils.tree module

class cellsystem.utils.tree.Tree(tree=None)

Bases: object

Wrapper for the ETE Tree class with some extra conveniences.

copy()

Make a copy of the tree.

prune_leaves(to_stay)

Prune tree branches to leave only the leaves in to_stay.

show(*args, inline=False, styling=None, savefig=None, **kwargs)

Display the tree.

Module contents